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Plant Breeding and Genomics

Posted on November 14, 2019November 14, 2019 by plant-breeding-genomics

Population Development and Genetics

These tutorials describe the development and use of breeding populations as well as the effect of population genetics structure on linkage.

Germplasm

  • Backcrossing, Backcross (BC) Populations, and Backcross Breeding
  • Cross-Pollinating Tomatoes for Hybrid Production and Population Development
  • Germplasm Information at SeedQuest
  • Germplasm Resources Information Network (GRIN) Tutorial
  • How to Use Doubled Haploids to Improve Winter Wheat
  • Inbred Backcross (IBC) Lines and Populations

Population Structure and Linkage

  • Association Mapping Using TASSEL Software
  • Creating a Kinship Matrix Using Microsatellite Analyzer
  • Downstream Analysis of SNP Markers Using MSA, GGT, and STRUCTURE Software
  • Equation to Estimate Sample Size Required for QTL Detection
  • Estimation of Linkage Disequilibrium Decay
  • Incorporating Genomic Data into Breeding Programs
  • Linkage Disequilibrium: Conifer Genomics Module 10
  • Linkage, QTL, Mapping Populations, and Marker-Assisted-Selection
  • Mapping & QTL Analysis
  • Population Genetics: Conifer Genomics Module 3
  • Potato Genomics: Generation and Utility of Genome and Transcriptome Sequence
  • Quantitative Genetics: Conifer Genomics Module 4
  • Structure Software

 

PBGworks 1562

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This is a National Cooperative Extension Resource

This work is supported in part by New Technologies for Agriculture Extension grant no. 2020-41595-30123 from the USDA National Institute of Food and Agriculture. Any opinions, findings, conclusions, or recommendations expressed in this publication are those of the author(s) and do not necessarily reflect the view of the U.S. Department of Agriculture.

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